Story

12 years before the events of Defiance, the Ultimate Weapon was succesfully activated by Team Flare, the blast hit the eastern region of Portus causing massive destruction and the loss of many lives both human and Pokémon.

In response, the government of Portus sent an ultimatum to Kalos asking for the destruction of the Ultimate Weapon. Kalos denied this request and engaged in a all out war with Portus for 2 years until Alphonze Bronz, Trevor J Kane and other soldiers managed to take control of the ultimate weapon while Trevor's brother spearheaded a rebellion against the Portus Government intended on ending the war on both sides.

In the following decade, Alphonze along with the friends he made during the war took it upon themselves to restore Portus to it's former glory. An effort which would culminate with a new Pokémon League available to all trainers in the world.

Meanwhile, Xavier, a retired Pokémon trainer that quit after a tragic incident has his pokémon stolen by the misterious Team Phoenix and is caught in the middle of the conflict between the authorities of Portus and Team Phoenix.

While Toby, a young boy with a weak heart tries to prove his worth in the Portu's Pokémon league but finds himself as part of Team Phoenix's sinister plans.

Spoilers:

Chapter 1: "I'm not a trainer!"

Chapter 2: "Facing the facts"

Chapter 3: "Inside the Ark"

Chapter 4: "The Limiter"

Chapter 5: "Pushed against the wall"

...